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Applications I Like

Desktop Environments

MATE (ctrl+alt+right/left = change desktop)
XFCE for OpenBSD, FreeBSD (pkg xfce4)

Media

cmus (CLI music player, easy to use)
totem, mpv (minimal videoplayer)
vlc, smplayer2 (not-so-minimal videoplayer)
ffmpeg (CLI, convert/edit videos)

Editors

vim, emacs, mg
rstudio (GNU R statistics IDE) http://rstudio.com

Filemanager

XFCE/MATE defaults are a-ok
midnight commander
hamster-time-tracker (if you use Gnome, it's integrated)
timetrap - http://github.com/samg/timetrap (time tracking, CLI)

Backups

borg
CloneZilla Live usb bootable (for images of complete filesystems)
rsync

Tools

gufw (GUI firewall manager)
htop (console taskmanager)
urxvt (a nice terminal)
pass (unix standard password manager, CLI)
clamav (antivirus)
rkhunter (rootkit hunter)

Office

LibreOffice (Office Suite)
gimp (image manipulation)
simple-scan (minimal scanning, gnome-default)
scantailor (cut and edit your scans)
exiftool (removing EXIF-data from pictures)
gnome-manual-duplex (Duplex printing with printers that have no duplex option https://sourceforge.net/projects/g-manual-duplex/files/ )
bkchem (draw chemical formulas)
okular (commenting PDFs, set bookmarks, etc)

Internet

transmission (torrentclient)
- crashed my WiFi without survivors when using UDP for some reason
irssi (irc chat, CLI)